Packages and Apps

Open-source R packages and interactive Shiny apps from my research and teaching, including multinomialTS for state-space modelling of community time series.

Software that came out of my research and teaching: R packages implementing methods from the papers, and interactive apps I use to teach modelling concepts. Everything is open source. The full set is on my GitHub.

R package · Methods in Ecology and Evolution · 2026 multinomialTS State-space modelling of multinomially distributed data. Estimate how environmental drivers relate to each taxon, and how taxa interact, directly from count data such as fossil pollen. Documentation, install, paper and workshops →